Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 2.31
Average sequence ID: 0.277108433735
Average free energy: 14.244
Average covariation: -0.075
Average basepair probability: 0.282557254397
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
acSDKWDMYMCSRGGURCRRUYMAGRRGCWKYCARGYYASUUGUCRGAWKUYRYWYWKSRSAUGARYGYSMGYURUYUYRRARCYUUGCC YGGGUGCCURYMWarcmccagagcc
........(.....(.(((.(.....((..((((.((....(.(..(.........)..).)...)).)).))....)).....).))). )...)....................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table