Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 4.68
Average sequence ID: 0.35805710535
Average free energy: 0.5975
Average covariation: 0.339285714286
Average basepair probability: 0.589946995831
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
ggkMAAAAMRCUKCURSCYRMAGYURGUUUYACAKGSUGGYWUGkSASCsuaURUCURWMYAUUUMWCURUkSYARMACMAUKYRAAAYY RRYRUUaSRYMGKGHAARVMYWGCCagcgcu
...........(.(..(((.(.((((((((((.((((((.(...........(((..............)).).).)))))).))))))) ))).)...)))..).)...............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table