Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 26.47
Average sequence ID: 0.773060911481
Average free energy: -35.2881481481
Average covariation: -0.0672771672772
Average basepair probability: 0.811831573931
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
aaGAAGAUCUCAKGCUGUGACCCUCYAGAGGuaaGAAGCRCUUUCUGUUGUuukuCURAAAGAAAASAAMGYGCUUCCYUUUAGAGKGUU AmCYSUUUGAGAAAAGCAACruuua
.......(((((.((.(((((.(((((((((...((((((((((((....(....(.....))..))))))))))))))))))))).))) ).).)).))))).............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table