Results

You can download the results in the following formats: fasta clustal stockholm col
RNAforester
CPU time: 1.87
Average sequence ID: 0.147395928847
Average free energy: 17.3361538462
Average covariation: -0.271916329285
Average basepair probability: 0.148463336439
Canonical basepairs: NA

Sequence and structure consensus for RNAforester
rawwMrwuaSgAgYyCGuRKwCUmVcrckkrsacCucammksgmugWugygaagacusmgugaaaauKGGuSWgmRYgRucuWSHvSMYw GMYaKYkSuusgmcugwcgwbaGcrysamgsagWWWkuaVGWYACMRcMMgYYrGCwcKYAYcygGdKRWgSWcKYRcgyyucugagGcW UcSUcWhGYYgYHukwRGRKyCurMhvkrmksmrkMaaawvyKmymasuaGGWYAgMRwuRyw
.........((..((.(((((.((.(.(((((..(((((......)).)))....))))).).....((((.((.(((....(((.(((. (((.((.(..(.(((.(.(......)).)))...((...(((........)))..)..).)...)).)).)).))).)..........)) .)).).))).))..)..)).).).).....(((........)))....)))))).........

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
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