Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 113.73
Average sequence ID: 0.223720544919
Average free energy: -40.9280952381
Average covariation: 0.766118364909
Average basepair probability: 0.792308524202
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
wrshsvcuykmwgSMUYYKMYUSCSURSKuGRKRSYRcYRKuWSUWaSYUWWRVHWUSUKURYKKWkraGSUVYMMAVguYYgMRRSmWK BSDMsWDSAAMWVaURuYRKBWCCCSYDSSARMYWVCRMCYMSvhmrbcrmbvgwmcucagg
....................(((((((((.(((((((.(((.((((.((((((((..(((((...................).))))..) )))).)))))))).)).)))))))))))))))).............................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table