Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 3.43
Average sequence ID: 0.345782356729
Average free energy: 1.36666666667
Average covariation: 0.321825396825
Average basepair probability: 0.566704872777
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
gSMBMRKGYYKYSMKKUSUCUKUMUSKCWAYWBKYGMHKAUGYGRUGYDMHBRCWCASYCRUACAGBRVKYGSWGRSRBRRMRWCACRRS RGARMMMGKYMCMRgc
........(((((..((....((((((((.(.(.(.(....((.................))....)).).).))))))))....))..) ))))............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table