Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 3.38
Average sequence ID: 0.390259329538
Average free energy: -6.27666666667
Average covariation: 0.228395061728
Average basepair probability: 0.637313185389
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
rUCWUWYYGKSYUCYWYMYAKWCCYUGUAGRYCCKRAYUUGUGAKRWDUWYYUKURWWRUCcACRRDUYMGRYUCUWGGRRRMURKGURG UYGVRCWYAWRCAYuyacagcu
........((...((.(.(((..(((..(((..((((((((((....(((....)))...).)))))))))..))).)))..))).).)) ....))................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table