Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 13.74
Average sequence ID: 0.286025912216
Average free energy: -2.71941176471
Average covariation: 0.179359243697
Average basepair probability: 0.433261391024
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
ccccacckmmkgrvmSSVSSRYGKGYUSYYSgUGGYYDGVUKMYSWRcRYWRYWKDRGHKGYWKCwrYBDSWMDBYWMWRMWSUBWGAUM AYaBVARWRYMRARRHUMCYYYYASMUCRBmmrrbshubyvkcmsg
........................(.((((..((..(((((((((((.(((.((((.(((............))).)))).))))))))) )).))).))..)))).).............................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table