Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 4.37
Average sequence ID: 0.424375
Average free energy: -0.816666666667
Average covariation: 0.180357142857
Average basepair probability: 0.537623531
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
ggSSYCVYSMYUGKSCWKYKGRRuguSYSRRGKUCYGWWAYACWSUCCGcASWSWGRSUMWSAKDKMWSWCAGUGCAUWACMGRWCUYUK UCYCDRMWGSYUYMYRGYMRCyg
............((((.((((((...(((((((.(.((....((.(..(..((((.........)).)).)).))....)).).)))))) ))))))).))))...........

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table