Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 2.74
Average sequence ID: 0.462643678161
Average free energy: -8.41
Average covariation: 0.065625
Average basepair probability: 0.521166363262
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
kKMRAUAUBUCUUUCUGCUYUCAGMUUCUUURCAKUGCKGMCUUGUKGCAUAURRAUCAAGCASCAUUGUACAGGGMUAUSAARGCAYYR AGACYUGKCYWCgyacca
...(.....(((((.((((((.(((.(((.(((((((((((.(((............)))))))))))))).))))))...)))))).)) ))).....).........

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table