Results

You can download the results in the following formats: fasta clustal stockholm col
RNAalifold
CPU time: .13
Average sequence ID: 0.355486862442
Average free energy: -7.525
Average covariation: 0.08125
Average basepair probability: 0.161336262978
Canonical basepairs: NA

Sequence and structure consensus for RNAalifold
MSYSDGRCHBMKYUKYUMUSUAUGKCHYUKUHWWMMWWYRCUKWKWMYARURYUCRGYUMAUAWAUWRAUVWRGRRCHRWRRSRCAGDGM MCWKRRAAAYCCAGCVYcggc
...............((((((...((((((((((((..((((.(((.(((((...........))))).)))))))..)))))))))))) ..)))))).............

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table