Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 6.96
Average sequence ID: 0.59645464025
Average free energy: -33.0933333333
Average covariation: 0.225694444444
Average basepair probability: 0.863314564158
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
rMMAYWCUSYKCMYYSYRGGVUGAGGUAGUAGGUUGUAYAGUUKgURGGGYMRKGAUAUYRggCCCCcVWYYAGGAGAUAACUAUACAAY CUACUGYCUUYCCURASGugryug
................(((((.(((((((((((((((((((((....((((.........)..))).............))))))))))) ))))))))))))))).........

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table