Results

You can download the results in the following formats: fasta clustal stockholm col
CMfinder
CPU time: 48.52
Average sequence ID: 0.241003390819
Average free energy: -50.9091304348
Average covariation: 0.949431818182
Average basepair probability: 0.818673441393
Canonical basepairs: NA

Sequence and structure consensus for CMfinder
uurcvAWMWKKUUYMCCKRGRMKRGKURKGGYWWRYRYYSRABRUKYUKKBaBRKYKRRRCMARCMRAMRYRUYGRRBRWWGRMMVYRCC YaMKUCMKRSCWSCASYYyCYKsmumsyuwcu
..........((((((((((((((((((((((((((((((((((((((((..............)))))))))))))))))))))))))) ).))))))))))))).................

The alignment colored using colorrna.pl of the Vienna package

Cluster tree of the methods














Please send any comments or report bugs to Elfar Torarinsson or Stinus Lindgreen
Table