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tmRNA example

Example from tmRNA database.
; ENTRY             pairingmask
; ----------
; **********
; ENTRY             AQU.AEO.
; ORGANISM          Aquifex aeolicus
; ACCESSION         AE000657 + AE000749
; WWW-ACCESS        http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&
                    db=Nucleotide&list_uids=6626248&dopt=GenBank + http://www.ncbi.nlm.nih.gov:80/
                    entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=02983975&dopt=GenBank
; LINEAGE (NCBI)    CELLULAR ORGANISMS; BACTERIA; AQUIFICALES; AQUIFICACEAE; AQUIFEX
; ----------
; **********
; ENTRY             THE.MAR.
; ORGANISM          Thermotoga maritima
; ACCESSION         AE001727 + GSP
; WWW-ACCESS        http://www.ncbi.nlm.nih.gov/htbin-post/Entrez/query?form=6&dopt=g&db=n&uid=04981015
                     + ftp://ftp.tigr.org/pub/data/t_maritima/
; LINEAGE (NCBI)    CELLULAR ORGANISMS; BACTERIA; THERMOTOGALES;
; ----------
; **********
; ENTRY             THE.THE.
; ORGANISM          Thermus thermophilus
; ACCESSION         Y15063
; WWW-ACCESS        http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&
                    db=Nucleotide&list_uids=03445395&dopt=GenBank
; LINEAGE (NCBI)    CELLULAR ORGANISMS; BACTERIA; THERMUS/DEINOCOCCUS GROUP; THERMUS GROUP; THERMUS
; ----------
; **********
; ENTRY             DEI.RAD.
; ORGANISM          Deinococcus radiodurans
; ACCESSION         GSP
; WWW-ACCESS        http://www.tigr.org/tdb/CMR/gdr/htmls/SplashPage.html
; LINEAGE (NCBI)    CELLULAR ORGANISMS; BACTERIA; THERMUS/DEINOCOCCUS GROUP; DEINOCOCCALES; DEINOCOCCUS
; ----------
; **********


Comments, questions, etc., email gorodkin@genome.ku.dk.


Last updated March 26th, 2007 by Jan Gorodkin